Image analysis course

Seminar Room 1 (CSBD)

Seminar Room 1


Pfotenhauerstr. 108

This course is aimed at beginners willing to get started with Image Analysis or to improve their basic knowledge.

The following concepts will be introduced with many ImageJ/Fiji hands-on-sessions and exercises along the way:

  • Day 1:
    • Basic concepts: image characteristics, visualisation, regions of interest and measurements
    • Segmentation 1: thresholding, mask/region analysis, spot detection and skeletonisation
  • Day 2:
    • Measurements in time sequences and tracking
    • The macro Recorder.
    • Segmentation 2: image filters such as erosion/dilation, distance maps and the watershed algorithm.
  • Day 3:
    • Visualize and explore 3D images
    • Spot detection and segmentation in 3D datasets
    • Big Data Viewer and Multiview Spim dataset

The course will be held from October 23rd to 25th from 9:00 to 17:00, in CSBD Seminar room 1.

If you are interested, follow the link to the registration form in the left menu.

In accordance with MPI-CBG recharge policy the course will cost 300 Euros for MPI-CBG staff (600 euros otherwise).  Please verify that this is O.K. with your group or service leader.

Image data