This Indico installation shall not be used to organise MPI-CBG courses and events from beginning of 2024 on. Please use MPG Indico instead.

ImageJ Macro course

Europe/Berlin
SR1 (MPI-CBG)

SR1

MPI-CBG

Pfotenhauerstr. 108
Description

This course is aimed at people with basic knowledge of ImageJ/Fiji tools and willing to automate there analysis.

The following concepts will be introduced with many hands-on and exercises:

  • Macro language Basics:
    • variables: numbers, strings and arrays
    • operators on strings and numbers
    • conditional statements and loops
  • Image analysis in a Macro
    • the Macro Recorder
    • navigate an image
    • combine images
  • Data visualisation and user interaction
    • the ROI Manager, Results Table and Overlays
    • User input: @Parameter annotation, wait for user dialog
    • Good practices for maintainable code and repeatable analysis

The course will be held on January 18th, 19th and 20th from 9:00 to 15:00 each day, in Seminar room 1.

If you are interested, follow the link to the registration form in the left menu.

In accordance with the new MPI-CBG course recharge policy note that the course will cost 150 Euros for MPI-CBG staff (300 euros otherwise).  Please verify that this is O.K. with your group or service leader. The selected participants will be notified after the end of the registration period.

Registration
Image Analysis course registration Form
Surveys
Evaluation Template
    • 09:00 10:45
      Macro language basics SR1

      SR1

      MPI-CBG

      Pfotenhauerstr. 108
    • 10:45 11:00
      Break 15m
    • 11:00 12:00
      Macro language basics SR1

      SR1

      MPI-CBG

      Pfotenhauerstr. 108
    • 12:00 13:00
      Lunch break 1h
    • 13:00 15:00
      Macro language basics SR1

      SR1

      MPI-CBG

      Pfotenhauerstr. 108
    • 09:00 10:45
      Image analysis in a Macro SR1

      SR1

      MPI-CBG

      Pfotenhauerstr. 108
    • 10:45 11:00
      Break 15m
    • 11:00 12:00
      Image analysis in a Macro SR1

      SR1

      MPI-CBG

      Pfotenhauerstr. 108
    • 12:00 13:00
      Lunch break 1h
    • 13:00 15:00
      Image analysis in a Macro SR1

      SR1

      MPI-CBG

      Pfotenhauerstr. 108
    • 09:00 10:45
      Data visualisation and User interaction SR1

      SR1

      MPI-CBG

      Pfotenhauerstr. 108
    • 10:45 11:00
      break 15m
    • 11:00 12:00
      Data visualisation and User interaction SR1

      SR1

      MPI-CBG

      Pfotenhauerstr. 108
    • 12:00 13:00
      Lunch break 1h
    • 13:00 14:30
      Data visualisation and User interaction SR1

      SR1

      MPI-CBG

      Pfotenhauerstr. 108
    • 14:30 15:00
      Feedback SR1

      SR1

      MPI-CBG

      Pfotenhauerstr. 108
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