This Indico installation shall not be used to organise MPI-CBG courses and events from beginning of 2024 on. Please use MPG Indico instead.
18-20 January 2017
Europe/Berlin timezone

This course is aimed at people with basic knowledge of ImageJ/Fiji tools and willing to automate there analysis.

The following concepts will be introduced with many hands-on and exercises:

  • Macro language Basics:
    • variables: numbers, strings and arrays
    • operators on strings and numbers
    • conditional statements and loops
  • Image analysis in a Macro
    • the Macro Recorder
    • navigate an image
    • combine images
  • Data visualisation and user interaction
    • the ROI Manager, Results Table and Overlays
    • User input: @Parameter annotation, wait for user dialog
    • Good practices for maintainable code and repeatable analysis

The course will be held on January 18th, 19th and 20th from 9:00 to 15:00 each day, in Seminar room 1.

If you are interested, follow the link to the registration form in the left menu.

In accordance with the new MPI-CBG course recharge policy note that the course will cost 150 Euros for MPI-CBG staff (300 euros otherwise).  Please verify that this is O.K. with your group or service leader. The selected participants will be notified after the end of the registration period.

Pfotenhauerstr. 108

Get your laptop ready for the course. You will need it to perform all the hands-on sessions and exercises.


Before the course:


  • Install a fresh version of Fiji on your laptop
  • Download materials (link coming soon)
  • Contact us if you have any issue with one of the above

On the day of the course bring your laptop and power supply !


There is an open survey.
Registration for this event is currently open.
Your browser is out of date!

Update your browser to view this website correctly. Update my browser now